Some corrections to the Java to OWL transformation support

profiles/org.universaal.tools.modelling.ontology.wizard/src/org/universaal/tools/modelling/ontology/wizard/wizards/CreateOntologyPOM.java

@@ -67,7 +67,7 @@ public class CreateOntologyPOM {
 			dep("org.universAAL.middleware", "mw.bus.ui", "1.1.0"),
 			dep("org.universAAL.ontology", "ont.phWorld", "1.1.0"),
 			dep("org.universAAL.ontology", "ont.profile", "1.1.0"),
-			dep("org.coode.owlapi", "owlapi", "3.2.4")
+			dep("org.coode.owlapi", "owlapi", "3.3")
 	};	
 	
 	static Repository[] repositories = new Repository[] {

transformations/org.universaal.tools.transformationcommand/src/org/universaal/tools/transformationcommand/handlers/TransformationHandler.java

@@ -148,9 +148,10 @@ public abstract class TransformationHandler extends AbstractHandler implements E
 		stream.setActivateOnWrite(true);
 		
 		// check if OWLSupport should be generated. TODO: I do not think that persistent properties are the best solution
-		String generateOWLSupport = "false";
+		String generateOWLSupport = "true";
 		try {
-			generateOWLSupport = inputFile.getProject().getPersistentProperty(new QualifiedName("generateJavaToOWL", "generateJavaToOWL"));
+			String tmpParamCheck = inputFile.getProject().getPersistentProperty(new QualifiedName("generateJavaToOWL", "generateJavaToOWL"));
+			generateOWLSupport = tmpParamCheck != null ? tmpParamCheck : generateOWLSupport;
 		} catch (CoreException e1) {
 			e1.printStackTrace();
 		}

transformations/org.universaal.tools.transformationcommand/transformations/ontUML2JavaV2.m2t

@@ -488,7 +488,7 @@ import java.io.FileWriter;
 import java.io.IOException;
 
 import org.semanticweb.owlapi.apibinding.OWLManager;
-import org.semanticweb.owlapi.io.OWLXMLOntologyFormat;
+import org.semanticweb.owlapi.io.RDFXMLOntologyFormat;
 import org.semanticweb.owlapi.model.IRI;
 import org.semanticweb.owlapi.model.OWLOntology;
 import org.semanticweb.owlapi.model.OWLOntologyCreationException;
@@ -528,11 +528,11 @@ public class ' ontologyName.firstToUpper() 'OWLCreator {
 			
 			OWLOntologyFormat format = manager.getOntologyFormat(owlOntology);
 			 
-			OWLXMLOntologyFormat owlxmlFormat = new OWLXMLOntologyFormat();
+			RDFXMLOntologyFormat rdfxmlFormat = new RDFXMLOntologyFormat();
 			if(format.isPrefixOWLOntologyFormat()) {
-				owlxmlFormat.copyPrefixesFrom(format.asPrefixOWLOntologyFormat());
+				rdfxmlFormat.copyPrefixesFrom(format.asPrefixOWLOntologyFormat());
 			}
-			manager.saveOntology(owlOntology, owlxmlFormat, IRI.create(file));
+			manager.saveOntology(owlOntology, rdfxmlFormat, IRI.create(file));
 			System.out.println("Saved ontology " + owlOntology + " in file ' ontologyName.firstToUpper() '.owl");
 		} catch (OWLOntologyCreationException e1) {
 			e1.printStackTrace();